Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.96□□□□□ -0.49
BdnfP21237 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
BdnfP21237 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
BdnfP21237 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.96□□□□□ -0.49
BdnfP21237 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.96□□□□□ -0.49
BdnfP21237 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.96□□□□□ -0.49
BdnfP21237 Gm14704-201ENSMUST00000120300 874 ntBASIC11.96□□□□□ -0.49
BdnfP21237 Gm10156-201ENSMUST00000122364 462 ntBASIC11.96□□□□□ -0.49
BdnfP21237 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
BdnfP21237 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
BdnfP21237 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.96□□□□□ -0.5
BdnfP21237 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
BdnfP21237 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.96□□□□□ -0.5
BdnfP21237 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
BdnfP21237 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
BdnfP21237 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
BdnfP21237 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.95□□□□□ -0.5
BdnfP21237 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
BdnfP21237 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
BdnfP21237 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
BdnfP21237 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.95□□□□□ -0.5
BdnfP21237 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.95□□□□□ -0.5
BdnfP21237 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.95□□□□□ -0.5
BdnfP21237 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.95□□□□□ -0.5
BdnfP21237 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
BdnfP21237 Gm6244-201ENSMUST00000178732 841 ntBASIC11.95□□□□□ -0.5
BdnfP21237 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.95□□□□□ -0.5
BdnfP21237 Gm7063-201ENSMUST00000186840 981 ntBASIC11.95□□□□□ -0.5
BdnfP21237 Gm37922-201ENSMUST00000195596 455 ntBASIC11.95□□□□□ -0.5
BdnfP21237 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
BdnfP21237 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.95□□□□□ -0.5
BdnfP21237 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.95□□□□□ -0.5
BdnfP21237 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.95□□□□□ -0.5
BdnfP21237 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.95□□□□□ -0.5
BdnfP21237 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
BdnfP21237 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms