Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm16112-201ENSMUST00000159075 382 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm27341-201ENSMUST00000183570 106 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm38018-201ENSMUST00000195651 540 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 AC159205.7-201ENSMUST00000225988 692 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Tnfrsf9P20334 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm16379-201ENSMUST00000161469 348 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Mir6979-201ENSMUST00000183927 56 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm28766-201ENSMUST00000191086 234 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm8762-201ENSMUST00000193486 339 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm37629-201ENSMUST00000193635 1050 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm18944-201ENSMUST00000207672 643 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Olfr1153-201ENSMUST00000052300 957 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tnfrsf9P20334 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf9P20334 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms