Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm5779-201ENSMUST00000218467 910 ntBASIC12.61□□□□□ -0.39
VimP20152 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.61□□□□□ -0.39
VimP20152 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.61□□□□□ -0.39
VimP20152 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VimP20152 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.61□□□□□ -0.39
VimP20152 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.61□□□□□ -0.39
VimP20152 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VimP20152 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.6□□□□□ -0.39
VimP20152 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.6□□□□□ -0.39
VimP20152 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.6□□□□□ -0.39
VimP20152 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.6□□□□□ -0.39
VimP20152 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.6□□□□□ -0.39
VimP20152 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.6□□□□□ -0.39
VimP20152 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
VimP20152 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.6□□□□□ -0.39
VimP20152 Gm10576-201ENSMUST00000191927 825 ntBASIC12.6□□□□□ -0.39
VimP20152 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.6□□□□□ -0.39
VimP20152 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
VimP20152 Gm10175-201ENSMUST00000086013 645 ntBASIC12.6□□□□□ -0.39
VimP20152 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.6□□□□□ -0.39
VimP20152 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VimP20152 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.6□□□□□ -0.39
VimP20152 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VimP20152 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VimP20152 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VimP20152 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
VimP20152 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.59□□□□□ -0.39
VimP20152 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.59□□□□□ -0.39
VimP20152 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.59□□□□□ -0.39
VimP20152 Gm43474-201ENSMUST00000196415 774 ntBASIC12.59□□□□□ -0.39
VimP20152 Gm43703-201ENSMUST00000200523 763 ntBASIC12.59□□□□□ -0.39
VimP20152 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
VimP20152 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.59□□□□□ -0.39
VimP20152 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.59□□□□□ -0.39
VimP20152 Gm26315-201ENSMUST00000083890 321 ntBASIC12.59□□□□□ -0.39
VimP20152 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
VimP20152 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VimP20152 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VimP20152 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms