Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Gm13097-201ENSMUST00000210722 397 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.95□□□□□ -0.5
Cntn1P12960 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Cntn1P12960 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.95□□□□□ -0.5
Cntn1P12960 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cntn1P12960 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.95□□□□□ -0.5
Cntn1P12960 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cntn1P12960 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Cntn1P12960 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Cntn1P12960 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Gm14832-201ENSMUST00000121289 322 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.94□□□□□ -0.5
Cntn1P12960 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 AA914427-201ENSMUST00000193194 1166 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cntn1P12960 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cntn1P12960 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cntn1P12960 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.94□□□□□ -0.5
Cntn1P12960 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cntn1P12960 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.93□□□□□ -0.5
Cntn1P12960 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.93□□□□□ -0.5
Cntn1P12960 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Gm2383-201ENSMUST00000181461 807 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.93□□□□□ -0.5
Cntn1P12960 Gm28882-201ENSMUST00000185504 314 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 Gm29199-201ENSMUST00000187766 775 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 Gm8885-201ENSMUST00000189382 598 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.93□□□□□ -0.5
Cntn1P12960 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.93□□□□□ -0.5
Cntn1P12960 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Mir433-201ENSMUST00000093564 124 ntBASIC11.93□□□□□ -0.5
Cntn1P12960 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cntn1P12960 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms