Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp6P0C0A3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.57□□□□□ -0.24
Chmp6P0C0A3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chmp6P0C0A3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm13492-201ENSMUST00000119772 665 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm24526-201ENSMUST00000082921 158 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm22058-201ENSMUST00000083393 310 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Chmp6P0C0A3 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.55□□□□□ -0.24
Chmp6P0C0A3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp6P0C0A3 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.55□□□□□ -0.24
Chmp6P0C0A3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms