Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TnfP06804 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TnfP06804 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.19□□□□□ -0.3
TnfP06804 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TnfP06804 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.19□□□□□ -0.3
TnfP06804 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TnfP06804 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Gm24749-201ENSMUST00000157838 343 ntBASIC13.19□□□□□ -0.3
TnfP06804 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.19□□□□□ -0.3
TnfP06804 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.19□□□□□ -0.3
TnfP06804 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TnfP06804 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TnfP06804 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
TnfP06804 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.19□□□□□ -0.3
TnfP06804 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TnfP06804 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.18□□□□□ -0.3
TnfP06804 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.18□□□□□ -0.3
TnfP06804 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.18□□□□□ -0.3
TnfP06804 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.18□□□□□ -0.3
TnfP06804 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 Mir5132-201ENSMUST00000175166 71 ntBASIC13.18□□□□□ -0.3
TnfP06804 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 Gm7003-201ENSMUST00000195089 312 ntBASIC13.18□□□□□ -0.3
TnfP06804 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TnfP06804 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TnfP06804 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TnfP06804 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TnfP06804 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TnfP06804 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.17□□□□□ -0.3
TnfP06804 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TnfP06804 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TnfP06804 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
TnfP06804 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TnfP06804 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.17□□□□□ -0.3
TnfP06804 Gm11989-201ENSMUST00000117240 672 ntBASIC13.17□□□□□ -0.3
TnfP06804 Gm4909-201ENSMUST00000118749 794 ntBASIC13.17□□□□□ -0.3
TnfP06804 Gm11362-201ENSMUST00000118838 850 ntBASIC13.17□□□□□ -0.3
TnfP06804 Gm12217-201ENSMUST00000118858 696 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms