Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm15276-201ENSMUST00000145953 498 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm6963-201ENSMUST00000147879 379 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 AA914427-201ENSMUST00000193194 1166 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm18711-201ENSMUST00000199341 750 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxa4P06798 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxa4P06798 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.26□□□□□ -0.45
Hoxa4P06798 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxa4P06798 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxa4P06798 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxa4P06798 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm23912-201ENSMUST00000104687 87 ntBASIC12.25□□□□□ -0.45
Hoxa4P06798 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm9230-201ENSMUST00000188228 532 ntBASIC12.25□□□□□ -0.45
Hoxa4P06798 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.25□□□□□ -0.45
Hoxa4P06798 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Hoxa4P06798 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.25□□□□□ -0.45
Hoxa4P06798 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxa4P06798 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.25□□□□□ -0.45
Hoxa4P06798 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxa4P06798 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hoxa4P06798 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.24□□□□□ -0.45
Hoxa4P06798 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxa4P06798 Gm25890-201ENSMUST00000177643 165 ntBASIC12.24□□□□□ -0.45
Hoxa4P06798 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.24□□□□□ -0.45
Hoxa4P06798 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.24□□□□□ -0.45
Hoxa4P06798 Gm22614-201ENSMUST00000178300 165 ntBASIC12.24□□□□□ -0.45
Hoxa4P06798 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms