Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm13736-201ENSMUST00000119272 253 ntBASIC12.61□□□□□ -0.39
PdgfrbP05622 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm13316-201ENSMUST00000140537 691 ntBASIC12.61□□□□□ -0.39
PdgfrbP05622 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm9630-201ENSMUST00000178304 885 ntBASIC12.61□□□□□ -0.39
PdgfrbP05622 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm38002-201ENSMUST00000193255 180 ntBASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm43133-201ENSMUST00000197472 463 ntBASIC12.61□□□□□ -0.39
PdgfrbP05622 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.61□□□□□ -0.39
PdgfrbP05622 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
PdgfrbP05622 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
PdgfrbP05622 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.61□□□□□ -0.39
PdgfrbP05622 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
PdgfrbP05622 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm27572-201ENSMUST00000183702 255 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm27243-201ENSMUST00000183964 521 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm38158-201ENSMUST00000194617 339 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm19309-201ENSMUST00000218295 205 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.6□□□□□ -0.39
PdgfrbP05622 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
PdgfrbP05622 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
PdgfrbP05622 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms