Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.87□□□□□ -0.35
PrnpP04925 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PrnpP04925 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.86□□□□□ -0.35
PrnpP04925 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.86□□□□□ -0.35
PrnpP04925 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.86□□□□□ -0.35
PrnpP04925 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.86□□□□□ -0.35
PrnpP04925 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Gm8100-201ENSMUST00000182906 988 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Gm27438-201ENSMUST00000183480 110 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.86□□□□□ -0.35
PrnpP04925 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Gm43916-201ENSMUST00000205062 967 ntBASIC12.86□□□□□ -0.35
PrnpP04925 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.86□□□□□ -0.35
PrnpP04925 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.86□□□□□ -0.35
PrnpP04925 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
PrnpP04925 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.86□□□□□ -0.35
PrnpP04925 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
PrnpP04925 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
PrnpP04925 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
PrnpP04925 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PrnpP04925 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PrnpP04925 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PrnpP04925 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
PrnpP04925 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
PrnpP04925 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.85□□□□□ -0.35
PrnpP04925 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.85□□□□□ -0.35
PrnpP04925 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Gm11511-201ENSMUST00000118146 540 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Gm14724-201ENSMUST00000118400 537 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Gm15782-201ENSMUST00000121073 445 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PrnpP04925 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
PrnpP04925 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Gm2965-201ENSMUST00000198365 343 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Gm18711-201ENSMUST00000199341 750 ntBASIC12.85□□□□□ -0.35
PrnpP04925 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
PrnpP04925 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Ginm1-202ENSMUST00000065124 300 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Gm26035-201ENSMUST00000083065 308 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PrnpP04925 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.85□□□□□ -0.35
PrnpP04925 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PrnpP04925 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PrnpP04925 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms