Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm21092-201ENSMUST00000178995 955 ntBASIC15□□□□□ -0.01
Col4a1P02463 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15□□□□□ -0.01
Col4a1P02463 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC15□□□□□ -0.01
Col4a1P02463 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15□□□□□ -0.01
Col4a1P02463 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15□□□□□ -0.01
Col4a1P02463 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col4a1P02463 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15□□□□□ -0.01
Col4a1P02463 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col4a1P02463 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col4a1P02463 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col4a1P02463 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Gm15207-201ENSMUST00000119259 442 ntBASIC14.99□□□□□ -0.01
Col4a1P02463 Mir1901-201ENSMUST00000122616 78 ntBASIC14.99□□□□□ -0.01
Col4a1P02463 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Col4a1P02463 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col4a1P02463 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
Col4a1P02463 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col4a1P02463 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col4a1P02463 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col4a1P02463 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.98□□□□□ -0.01
Col4a1P02463 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col4a1P02463 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.98□□□□□ -0.01
Col4a1P02463 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Col4a1P02463 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Gm4654-201ENSMUST00000183305 982 ntBASIC14.98□□□□□ -0.01
Col4a1P02463 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.98□□□□□ -0.01
Col4a1P02463 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col4a1P02463 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.98□□□□□ -0.01
Col4a1P02463 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col4a1P02463 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col4a1P02463 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.97□□□□□ -0.01
Col4a1P02463 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.97□□□□□ -0.01
Col4a1P02463 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.97□□□□□ -0.01
Col4a1P02463 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.97□□□□□ -0.01
Col4a1P02463 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col4a1P02463 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col4a1P02463 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm14585-201ENSMUST00000120713 634 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms