Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
P01852 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.41□□□□□ -0.58
P01852 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
P01852 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.41□□□□□ -0.58
P01852 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.41□□□□□ -0.58
P01852 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
P01852 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.4□□□□□ -0.58
P01852 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
P01852 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
P01852 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.4□□□□□ -0.58
P01852 Gm15703-201ENSMUST00000120250 880 ntBASIC11.4□□□□□ -0.58
P01852 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.4□□□□□ -0.58
P01852 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
P01852 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.4□□□□□ -0.58
P01852 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.4□□□□□ -0.58
P01852 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.4□□□□□ -0.58
P01852 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P01852 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
P01852 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P01852 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.39□□□□□ -0.59
P01852 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
P01852 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P01852 Gm11222-201ENSMUST00000119005 738 ntBASIC11.39□□□□□ -0.59
P01852 Gm13736-201ENSMUST00000119272 253 ntBASIC11.39□□□□□ -0.59
P01852 Gm13342-201ENSMUST00000121055 207 ntBASIC11.39□□□□□ -0.59
P01852 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
P01852 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
P01852 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.39□□□□□ -0.59
P01852 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
P01852 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.39□□□□□ -0.59
P01852 Gm43822-201ENSMUST00000200285 476 ntBASIC11.39□□□□□ -0.59
P01852 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.39□□□□□ -0.59
P01852 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.39□□□□□ -0.59
P01852 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.39□□□□□ -0.59
P01852 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.39□□□□□ -0.59
P01852 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P01852 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms