Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Col5a1O88207 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col5a1O88207 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
Col5a1O88207 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col5a1O88207 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Gm12857-201ENSMUST00000117678 592 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.07□□□□□ -0.64
Col5a1O88207 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.07□□□□□ -0.64
Col5a1O88207 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 Gm25604-201ENSMUST00000158359 133 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col5a1O88207 Mir8115-201ENSMUST00000184992 119 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.07□□□□□ -0.64
Col5a1O88207 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Gm25201-201ENSMUST00000083093 170 ntBASIC11.07□□□□□ -0.64
Col5a1O88207 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.07□□□□□ -0.64
Col5a1O88207 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col5a1O88207 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC11.06□□□□□ -0.64
Col5a1O88207 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.06□□□□□ -0.64
Col5a1O88207 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col5a1O88207 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.06□□□□□ -0.64
Col5a1O88207 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Col5a1O88207 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Col5a1O88207 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.06□□□□□ -0.64
Col5a1O88207 Gm14219-201ENSMUST00000120414 288 ntBASIC11.06□□□□□ -0.64
Col5a1O88207 Gm1848-201ENSMUST00000120711 789 ntBASIC11.06□□□□□ -0.64
Col5a1O88207 Gm12516-201ENSMUST00000120819 385 ntBASIC11.06□□□□□ -0.64
Col5a1O88207 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Col5a1O88207 Gm44882-201ENSMUST00000205702 802 ntBASIC11.06□□□□□ -0.64
Col5a1O88207 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Col5a1O88207 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.06□□□□□ -0.64
Col5a1O88207 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.06□□□□□ -0.64
Col5a1O88207 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col5a1O88207 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col5a1O88207 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col5a1O88207 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Gm14724-201ENSMUST00000118400 537 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.05□□□□□ -0.64
Col5a1O88207 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.05□□□□□ -0.64
Col5a1O88207 Gm18711-201ENSMUST00000199341 750 ntBASIC11.05□□□□□ -0.64
Col5a1O88207 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Col5a1O88207 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col5a1O88207 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms