Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.31□□□□□ -0.12
Copb2O55029 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Copb2O55029 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.3□□□□□ -0.12
Copb2O55029 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Copb2O55029 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.3□□□□□ -0.12
Copb2O55029 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Copb2O55029 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.3□□□□□ -0.12
Copb2O55029 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.3□□□□□ -0.12
Copb2O55029 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.3□□□□□ -0.12
Copb2O55029 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.3□□□□□ -0.12
Copb2O55029 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Copb2O55029 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Copb2O55029 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.3□□□□□ -0.12
Copb2O55029 Gm18753-201ENSMUST00000201000 566 ntBASIC14.3□□□□□ -0.12
Copb2O55029 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Gm45598-202ENSMUST00000210719 986 ntBASIC14.3□□□□□ -0.12
Copb2O55029 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Copb2O55029 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.3□□□□□ -0.12
Copb2O55029 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Copb2O55029 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Copb2O55029 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Copb2O55029 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Copb2O55029 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 B9d1os-201ENSMUST00000137010 674 ntBASIC14.29□□□□□ -0.12
Copb2O55029 Gm24749-201ENSMUST00000157838 343 ntBASIC14.29□□□□□ -0.12
Copb2O55029 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.29□□□□□ -0.12
Copb2O55029 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Gm32999-201ENSMUST00000192693 562 ntBASIC14.29□□□□□ -0.12
Copb2O55029 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Gm45433-201ENSMUST00000209386 247 ntBASIC14.29□□□□□ -0.12
Copb2O55029 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Copb2O55029 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.29□□□□□ -0.12
Copb2O55029 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Copb2O55029 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Copb2O55029 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Copb2O55029 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Copb2O55029 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Copb2O55029 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Copb2O55029 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms