Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.78□□□□□ -0.04
Smarce1O54941 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.78□□□□□ -0.04
Smarce1O54941 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Gm15806-201ENSMUST00000120696 955 ntBASIC14.78□□□□□ -0.04
Smarce1O54941 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.78□□□□□ -0.04
Smarce1O54941 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.78□□□□□ -0.04
Smarce1O54941 Gm44882-201ENSMUST00000205702 802 ntBASIC14.78□□□□□ -0.04
Smarce1O54941 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Smarce1O54941 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Smarce1O54941 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.78□□□□□ -0.04
Smarce1O54941 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarce1O54941 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Smarce1O54941 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Smarce1O54941 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smarce1O54941 Gm11964-201ENSMUST00000120982 444 ntBASIC14.77□□□□□ -0.05
Smarce1O54941 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.77□□□□□ -0.05
Smarce1O54941 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarce1O54941 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.77□□□□□ -0.05
Smarce1O54941 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.77□□□□□ -0.05
Smarce1O54941 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Smarce1O54941 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.77□□□□□ -0.05
Smarce1O54941 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarce1O54941 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smarce1O54941 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarce1O54941 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Smarce1O54941 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smarce1O54941 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarce1O54941 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smarce1O54941 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarce1O54941 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarce1O54941 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarce1O54941 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.77□□□□□ -0.05
Smarce1O54941 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smarce1O54941 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.76□□□□□ -0.05
Smarce1O54941 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Smarce1O54941 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smarce1O54941 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.76□□□□□ -0.05
Smarce1O54941 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms