Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.85□□□□□ -0.83
Efnb3O35393 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Efnb3O35393 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Efnb3O35393 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Efnb3O35393 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Efnb3O35393 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.84□□□□□ -0.83
Efnb3O35393 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.84□□□□□ -0.83
Efnb3O35393 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.84□□□□□ -0.83
Efnb3O35393 AC156560.2-201ENSMUST00000221232 264 ntBASIC9.84□□□□□ -0.83
Efnb3O35393 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Efnb3O35393 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.84□□□□□ -0.83
Efnb3O35393 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.84□□□□□ -0.83
Efnb3O35393 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Efnb3O35393 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.83□□□□□ -0.84
Efnb3O35393 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Efnb3O35393 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC9.83□□□□□ -0.84
Efnb3O35393 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.83□□□□□ -0.84
Efnb3O35393 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Efnb3O35393 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.83□□□□□ -0.84
Efnb3O35393 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Efnb3O35393 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Efnb3O35393 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms