Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm5100-201ENSMUST00000195631 589 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm42657-201ENSMUST00000201746 211 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm7940-201ENSMUST00000218195 769 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm3619-201ENSMUST00000219947 775 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC18.79■□□□□ 0.6
Polr1aO35134 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Polr1aO35134 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.78■□□□□ 0.6
Polr1aO35134 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Polr1aO35134 Gm25880-201ENSMUST00000104331 132 ntBASIC18.78■□□□□ 0.6
Polr1aO35134 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC18.78■□□□□ 0.6
Polr1aO35134 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Gm8342-201ENSMUST00000209839 757 ntBASIC18.78■□□□□ 0.6
Polr1aO35134 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC18.78■□□□□ 0.6
Polr1aO35134 AC113082.1-201ENSMUST00000217324 327 ntBASIC18.78■□□□□ 0.6
Polr1aO35134 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC18.78■□□□□ 0.6
Polr1aO35134 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC18.78■□□□□ 0.6
Polr1aO35134 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Polr1aO35134 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC18.78■□□□□ 0.6
Polr1aO35134 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr1aO35134 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.77■□□□□ 0.6
Polr1aO35134 Gm11783-201ENSMUST00000119549 885 ntBASIC18.77■□□□□ 0.6
Polr1aO35134 Gm14942-201ENSMUST00000119642 336 ntBASIC18.77■□□□□ 0.6
Polr1aO35134 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC18.77■□□□□ 0.6
Polr1aO35134 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Polr1aO35134 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Polr1aO35134 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr1aO35134 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Polr1aO35134 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Polr1aO35134 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Polr1aO35134 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Polr1aO35134 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Polr1aO35134 Gm6450-201ENSMUST00000200896 574 ntBASIC18.77■□□□□ 0.59
Polr1aO35134 Gm3793-201ENSMUST00000204973 672 ntBASIC18.77■□□□□ 0.59
Polr1aO35134 Gm45120-201ENSMUST00000208880 408 ntBASIC18.77■□□□□ 0.59
Polr1aO35134 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Polr1aO35134 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Polr1aO35134 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Polr1aO35134 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Polr1aO35134 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Polr1aO35134 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.76■□□□□ 0.59
Polr1aO35134 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Polr1aO35134 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Gm7150-201ENSMUST00000122032 981 ntBASIC18.76■□□□□ 0.59
Polr1aO35134 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC18.76■□□□□ 0.59
Polr1aO35134 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Polr1aO35134 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Polr1aO35134 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Polr1aO35134 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms