Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.81□□□□□ -0.36
Trove2O08848 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trove2O08848 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trove2O08848 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trove2O08848 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trove2O08848 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.81□□□□□ -0.36
Trove2O08848 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trove2O08848 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trove2O08848 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trove2O08848 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trove2O08848 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.8□□□□□ -0.36
Trove2O08848 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.8□□□□□ -0.36
Trove2O08848 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.8□□□□□ -0.36
Trove2O08848 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trove2O08848 Gm27701-201ENSMUST00000184498 110 ntBASIC12.8□□□□□ -0.36
Trove2O08848 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.8□□□□□ -0.36
Trove2O08848 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.8□□□□□ -0.36
Trove2O08848 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.8□□□□□ -0.36
Trove2O08848 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trove2O08848 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.8□□□□□ -0.36
Trove2O08848 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trove2O08848 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trove2O08848 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.8□□□□□ -0.36
Trove2O08848 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.79□□□□□ -0.36
Trove2O08848 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trove2O08848 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trove2O08848 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trove2O08848 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.79□□□□□ -0.36
Trove2O08848 Gm23984-201ENSMUST00000157139 203 ntBASIC12.79□□□□□ -0.36
Trove2O08848 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Gm28911-201ENSMUST00000188837 117 ntBASIC12.79□□□□□ -0.36
Trove2O08848 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trove2O08848 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trove2O08848 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.79□□□□□ -0.36
Trove2O08848 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trove2O08848 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms