Protein–RNA interactions for Protein: J3QK56

4930544D05Rik, RIKEN cDNA 4930544D05 gene, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4930544D05RikJ3QK56 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm38341-201ENSMUST00000195357 515 ntBASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
4930544D05RikJ3QK56 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
4930544D05RikJ3QK56 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm9630-201ENSMUST00000178304 885 ntBASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm27023-201ENSMUST00000182372 285 ntBASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm38266-201ENSMUST00000194931 421 ntBASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm44124-201ENSMUST00000204159 472 ntBASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
4930544D05RikJ3QK56 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Gm28882-201ENSMUST00000185504 314 ntBASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Gm37259-201ENSMUST00000193903 849 ntBASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
4930544D05RikJ3QK56 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms