Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm26035-201ENSMUST00000083065 308 ntBASIC11.7□□□□□ -0.54
Colca2F8VPY8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Colca2F8VPY8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.7□□□□□ -0.54
Colca2F8VPY8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm25076-201ENSMUST00000104098 132 ntBASIC11.69□□□□□ -0.54
Colca2F8VPY8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm16166-201ENSMUST00000118291 787 ntBASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm24844-201ENSMUST00000158679 127 ntBASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm4310-201ENSMUST00000177847 889 ntBASIC11.69□□□□□ -0.54
Colca2F8VPY8 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm5100-201ENSMUST00000195631 589 ntBASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm44506-201ENSMUST00000206278 965 ntBASIC11.69□□□□□ -0.54
Colca2F8VPY8 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.69□□□□□ -0.54
Colca2F8VPY8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Colca2F8VPY8 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gm8531-201ENSMUST00000188319 893 ntBASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gm45594-201ENSMUST00000211717 241 ntBASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gm25201-201ENSMUST00000083093 170 ntBASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.68□□□□□ -0.54
Colca2F8VPY8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Colca2F8VPY8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Colca2F8VPY8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms