Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh9F8VPK8 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm16177-201ENSMUST00000120728 718 ntBASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm8018-201ENSMUST00000173536 789 ntBASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm6266-201ENSMUST00000203844 806 ntBASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh9F8VPK8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm13315-201ENSMUST00000120376 991 ntBASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm23119-201ENSMUST00000158610 140 ntBASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdh9F8VPK8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms