Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc188F6WEU2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc188F6WEU2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc188F6WEU2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc188F6WEU2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm11511-201ENSMUST00000118146 540 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm14270-201ENSMUST00000118388 846 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm12906-201ENSMUST00000154610 441 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm17192-201ENSMUST00000169031 511 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm8815-201ENSMUST00000173809 620 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm7082-201ENSMUST00000209880 969 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc188F6WEU2 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm11996-201ENSMUST00000117538 915 ntBASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm22379-201ENSMUST00000157480 131 ntBASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm18561-201ENSMUST00000206027 804 ntBASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm5705-201ENSMUST00000066241 711 ntBASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc188F6WEU2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Gm13445-201ENSMUST00000121664 307 ntBASIC12.46□□□□□ -0.41
Ccdc188F6WEU2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms