Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Gm4157-201ENSMUST00000211647 679 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Gm807-202ENSMUST00000224929 408 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.9□□□□□ -0.02
Ube4aE9Q735 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.9□□□□□ -0.02
Ube4aE9Q735 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube4aE9Q735 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Gm5733-201ENSMUST00000190232 939 ntBASIC14.89□□□□□ -0.03
Ube4aE9Q735 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.89□□□□□ -0.03
Ube4aE9Q735 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Gm29787-201ENSMUST00000222129 849 ntBASIC14.89□□□□□ -0.03
Ube4aE9Q735 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.89□□□□□ -0.03
Ube4aE9Q735 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube4aE9Q735 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.88□□□□□ -0.03
Ube4aE9Q735 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Gm44882-201ENSMUST00000205702 802 ntBASIC14.88□□□□□ -0.03
Ube4aE9Q735 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.88□□□□□ -0.03
Ube4aE9Q735 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube4aE9Q735 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube4aE9Q735 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm12857-201ENSMUST00000117678 592 ntBASIC14.87□□□□□ -0.03
Ube4aE9Q735 Gm14724-201ENSMUST00000118400 537 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms