Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc1E9PZP8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Herc1E9PZP8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc1E9PZP8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc1E9PZP8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc1E9PZP8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc1E9PZP8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Gm22900-201ENSMUST00000104538 130 ntBASIC6.71□□□□□ -1.33
Herc1E9PZP8 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Gm4925-202ENSMUST00000168843 1561 ntBASIC6.71□□□□□ -1.33
Herc1E9PZP8 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Gm7445-201ENSMUST00000192115 340 ntBASIC6.71□□□□□ -1.33
Herc1E9PZP8 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Gm18164-201ENSMUST00000213769 927 ntBASIC6.71□□□□□ -1.33
Herc1E9PZP8 Gm18166-201ENSMUST00000215557 927 ntBASIC6.71□□□□□ -1.33
Herc1E9PZP8 CT573047.1-201ENSMUST00000223652 851 ntBASIC6.71□□□□□ -1.33
Herc1E9PZP8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC6.71□□□□□ -1.33
Herc1E9PZP8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC6.71□□□□□ -1.33
Herc1E9PZP8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc1E9PZP8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm7928-201ENSMUST00000181249 701 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm8601-201ENSMUST00000182096 909 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm5738-201ENSMUST00000206016 779 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 AC134860.2-201ENSMUST00000225277 1036 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm37691-201ENSMUST00000192147 2573 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 AC159899.1-201ENSMUST00000214024 733 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 AC158986.2-201ENSMUST00000227487 618 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Gm43509-201ENSMUST00000196551 2594 ntBASIC6.71□□□□□ -1.34
Herc1E9PZP8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Herc1E9PZP8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Gm15727-201ENSMUST00000122416 437 ntBASIC6.7□□□□□ -1.34
Herc1E9PZP8 Gm8574-201ENSMUST00000203207 924 ntBASIC6.7□□□□□ -1.34
Herc1E9PZP8 Gm44605-201ENSMUST00000206892 949 ntBASIC6.7□□□□□ -1.34
Herc1E9PZP8 AC132384.2-201ENSMUST00000218018 526 ntBASIC6.7□□□□□ -1.34
Herc1E9PZP8 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Herc1E9PZP8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms