Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Olfr584-201ENSMUST00000098210 964 ntBASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm26013-201ENSMUST00000104404 119 ntBASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Gm9136-201ENSMUST00000193368 454 ntBASIC12.54□□□□□ -0.4
Col4a6B1AVK5 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col4a6B1AVK5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Gm8459-201ENSMUST00000162504 760 ntBASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col4a6B1AVK5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Gm8574-201ENSMUST00000203207 924 ntBASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Gm6108-201ENSMUST00000208365 367 ntBASIC12.52□□□□□ -0.4
Col4a6B1AVK5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Gm9111-201ENSMUST00000219394 709 ntBASIC12.52□□□□□ -0.4
Col4a6B1AVK5 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col4a6B1AVK5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Col4a6B1AVK5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms