Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Gm27701-201ENSMUST00000184498 110 ntBASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Gm5896-201ENSMUST00000189662 1024 ntBASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Gm37497-201ENSMUST00000195830 798 ntBASIC10□□□□□ -0.81
Trav12d-1A0N8R0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Gm7287-201ENSMUST00000205267 602 ntBASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav12d-1A0N8R0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Gm4768-201ENSMUST00000206199 686 ntBASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Gm45668-201ENSMUST00000211271 493 ntBASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav12d-1A0N8R0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav12d-1A0N8R0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms