Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm10051-201ENSMUST00000145209 414 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm37246-201ENSMUST00000192665 835 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm18038-201ENSMUST00000197900 485 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm270-201ENSMUST00000223010 976 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm28729A0A1B0GSW2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm23251-201ENSMUST00000103773 110 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12616-201ENSMUST00000118594 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm25881-201ENSMUST00000157783 103 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm9550-201ENSMUST00000161130 862 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12624-201ENSMUST00000177615 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12621-201ENSMUST00000177760 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12615-201ENSMUST00000177970 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12622-201ENSMUST00000177975 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12627-201ENSMUST00000178412 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12625-201ENSMUST00000179122 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12614-201ENSMUST00000179586 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm12613-201ENSMUST00000180323 382 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm28729A0A1B0GSW2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28729A0A1B0GSW2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28729A0A1B0GSW2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28729A0A1B0GSW2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm28729A0A1B0GSW2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms