Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm8652-201ENSMUST00000181363 964 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm10146-201ENSMUST00000072739 309 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm10012-201ENSMUST00000078252 192 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav5-4A0A075B652 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm14921-201ENSMUST00000118643 908 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm11814-201ENSMUST00000119515 929 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm12490-201ENSMUST00000120255 560 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm11637-201ENSMUST00000120601 592 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm27486-201ENSMUST00000184923 80 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav5-4A0A075B652 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Cog3-203ENSMUST00000227473 4197 ntBASIC10.46□□□□□ -0.74
Trav5-4A0A075B652 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms