Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav8-1A0A075B641 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gm8410-201ENSMUST00000117225 605 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gm15393-201ENSMUST00000120499 219 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Mir1897-201ENSMUST00000122581 272 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gm7063-201ENSMUST00000186840 981 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gm29541-201ENSMUST00000191351 678 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Ndufaf2-202ENSMUST00000223734 556 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 AC133598.3-202ENSMUST00000224219 531 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 AC154305.4-201ENSMUST00000224520 614 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Gm13135-201ENSMUST00000117628 3121 ntBASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav8-1A0A075B641 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Gm37542-201ENSMUST00000192563 2832 ntBASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav8-1A0A075B641 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm17230-201ENSMUST00000171194 3942 ntBASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm13886-201ENSMUST00000117876 1183 ntBASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm27390-201ENSMUST00000184516 176 ntBASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm5264-201ENSMUST00000190584 848 ntBASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm9229-201ENSMUST00000222777 126 ntBASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Trav8-1A0A075B641 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms