Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Speer3W4VSP1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Speer3W4VSP1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Speer3W4VSP1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.06■□□□□ 0.96
Speer3W4VSP1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Speer3W4VSP1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Speer3W4VSP1 Gm10420-201ENSMUST00000121713 882 ntBASIC21.05■□□□□ 0.96
Speer3W4VSP1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.05■□□□□ 0.96
Speer3W4VSP1 Gm22567-201ENSMUST00000175542 342 ntBASIC21.05■□□□□ 0.96
Speer3W4VSP1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Speer3W4VSP1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Speer3W4VSP1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Speer3W4VSP1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Speer3W4VSP1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Speer3W4VSP1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Speer3W4VSP1 Cap2-205ENSMUST00000225824 1634 ntBASIC21.04■□□□□ 0.96
Speer3W4VSP1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Speer3W4VSP1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Speer3W4VSP1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Speer3W4VSP1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.03■□□□□ 0.96
Speer3W4VSP1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.03■□□□□ 0.96
Speer3W4VSP1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Speer3W4VSP1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Speer3W4VSP1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Speer3W4VSP1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Speer3W4VSP1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Speer3W4VSP1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.02■□□□□ 0.96
Speer3W4VSP1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Speer3W4VSP1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Speer3W4VSP1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Speer3W4VSP1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Speer3W4VSP1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Speer3W4VSP1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Speer3W4VSP1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Speer3W4VSP1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Speer3W4VSP1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Speer3W4VSP1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Speer3W4VSP1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21■□□□□ 0.95
Speer3W4VSP1 Gm5067-201ENSMUST00000170449 1009 ntBASIC21■□□□□ 0.95
Speer3W4VSP1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Speer3W4VSP1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Speer3W4VSP1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21■□□□□ 0.95
Speer3W4VSP1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Speer3W4VSP1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.99■□□□□ 0.95
Speer3W4VSP1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Speer3W4VSP1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Speer3W4VSP1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Speer3W4VSP1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Speer3W4VSP1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.98■□□□□ 0.95
Speer3W4VSP1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Speer3W4VSP1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Speer3W4VSP1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.97■□□□□ 0.95
Speer3W4VSP1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Speer3W4VSP1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Speer3W4VSP1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Speer3W4VSP1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Speer3W4VSP1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Speer3W4VSP1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.96■□□□□ 0.95
Speer3W4VSP1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Speer3W4VSP1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
Speer3W4VSP1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Speer3W4VSP1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Speer3W4VSP1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Speer3W4VSP1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Speer3W4VSP1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Speer3W4VSP1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Speer3W4VSP1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Speer3W4VSP1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms