Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Mrpl40Q9Z2Q5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Mrpl40Q9Z2Q5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mrpl40Q9Z2Q5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mrpl40Q9Z2Q5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mrpl40Q9Z2Q5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mrpl40Q9Z2Q5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.73■□□□□ 0.91
Mrpl40Q9Z2Q5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.73■□□□□ 0.91
Mrpl40Q9Z2Q5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mrpl40Q9Z2Q5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mrpl40Q9Z2Q5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mrpl40Q9Z2Q5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mrpl40Q9Z2Q5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrpl40Q9Z2Q5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Mrpl40Q9Z2Q5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mrpl40Q9Z2Q5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mrpl40Q9Z2Q5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.69■□□□□ 0.9
Mrpl40Q9Z2Q5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mrpl40Q9Z2Q5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mrpl40Q9Z2Q5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mrpl40Q9Z2Q5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Mrpl40Q9Z2Q5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrpl40Q9Z2Q5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mrpl40Q9Z2Q5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.65■□□□□ 0.9
Mrpl40Q9Z2Q5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms