Protein–RNA interactions for Protein: Q9Z1X0

Ccl27, C-C motif chemokine 27, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl27Q9Z1X0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl27Q9Z1X0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl27Q9Z1X0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccl27Q9Z1X0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl27Q9Z1X0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl27Q9Z1X0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl27Q9Z1X0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccl27Q9Z1X0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl27Q9Z1X0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccl27Q9Z1X0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl27Q9Z1X0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl27Q9Z1X0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccl27Q9Z1X0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.42■□□□□ 0.7
Ccl27Q9Z1X0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl27Q9Z1X0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl27Q9Z1X0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl27Q9Z1X0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl27Q9Z1X0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl27Q9Z1X0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl27Q9Z1X0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccl27Q9Z1X0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl27Q9Z1X0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl27Q9Z1X0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl27Q9Z1X0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl27Q9Z1X0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl27Q9Z1X0 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl27Q9Z1X0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl27Q9Z1X0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl27Q9Z1X0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl27Q9Z1X0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl27Q9Z1X0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl27Q9Z1X0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl27Q9Z1X0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl27Q9Z1X0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl27Q9Z1X0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms