Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Msh5Q9QUM7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Msh5Q9QUM7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Msh5Q9QUM7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.16■□□□□ 0.98
Msh5Q9QUM7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Msh5Q9QUM7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Msh5Q9QUM7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Msh5Q9QUM7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Msh5Q9QUM7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Msh5Q9QUM7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh5Q9QUM7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Msh5Q9QUM7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Msh5Q9QUM7 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.15■□□□□ 0.98
Msh5Q9QUM7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh5Q9QUM7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh5Q9QUM7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Msh5Q9QUM7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.14■□□□□ 0.98
Msh5Q9QUM7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Msh5Q9QUM7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
Msh5Q9QUM7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Msh5Q9QUM7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Msh5Q9QUM7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Msh5Q9QUM7 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC21.14■□□□□ 0.97
Msh5Q9QUM7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Msh5Q9QUM7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Msh5Q9QUM7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
Msh5Q9QUM7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Msh5Q9QUM7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Msh5Q9QUM7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Msh5Q9QUM7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Msh5Q9QUM7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Msh5Q9QUM7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Msh5Q9QUM7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.1■□□□□ 0.97
Msh5Q9QUM7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Msh5Q9QUM7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Msh5Q9QUM7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Msh5Q9QUM7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Msh5Q9QUM7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Msh5Q9QUM7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Msh5Q9QUM7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Msh5Q9QUM7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Msh5Q9QUM7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Msh5Q9QUM7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.07■□□□□ 0.96
Msh5Q9QUM7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.07■□□□□ 0.96
Msh5Q9QUM7 Gm5921-201ENSMUST00000075898 882 ntBASIC21.07■□□□□ 0.96
Msh5Q9QUM7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Msh5Q9QUM7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Msh5Q9QUM7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Msh5Q9QUM7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Msh5Q9QUM7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms