Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.77■□□□□ 0.44
Rbfox1Q9JJ43 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rbfox1Q9JJ43 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rbfox1Q9JJ43 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Rbfox1Q9JJ43 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.77■□□□□ 0.43
Rbfox1Q9JJ43 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rbfox1Q9JJ43 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbfox1Q9JJ43 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbfox1Q9JJ43 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbfox1Q9JJ43 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbfox1Q9JJ43 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbfox1Q9JJ43 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rbfox1Q9JJ43 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Gm7332-201ENSMUST00000118351 454 ntBASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rbfox1Q9JJ43 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rbfox1Q9JJ43 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rbfox1Q9JJ43 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rbfox1Q9JJ43 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rbfox1Q9JJ43 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rbfox1Q9JJ43 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rbfox1Q9JJ43 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rbfox1Q9JJ43 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rbfox1Q9JJ43 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rbfox1Q9JJ43 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rbfox1Q9JJ43 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbfox1Q9JJ43 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbfox1Q9JJ43 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbfox1Q9JJ43 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rbfox1Q9JJ43 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Gm27502-201ENSMUST00000183495 199 ntBASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rbfox1Q9JJ43 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rbfox1Q9JJ43 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbfox1Q9JJ43 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rbfox1Q9JJ43 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbfox1Q9JJ43 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.67■□□□□ 0.42
Rbfox1Q9JJ43 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbfox1Q9JJ43 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rbfox1Q9JJ43 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rbfox1Q9JJ43 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rbfox1Q9JJ43 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms