Protein–RNA interactions for Protein: Q9EQR4

Clca3a2, Chloride channel accessory 3A2, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a2Q9EQR4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca3a2Q9EQR4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clca3a2Q9EQR4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clca3a2Q9EQR4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clca3a2Q9EQR4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Clca3a2Q9EQR4 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clca3a2Q9EQR4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clca3a2Q9EQR4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clca3a2Q9EQR4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clca3a2Q9EQR4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Clca3a2Q9EQR4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clca3a2Q9EQR4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Clca3a2Q9EQR4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clca3a2Q9EQR4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clca3a2Q9EQR4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
Clca3a2Q9EQR4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.02■□□□□ 0.8
Clca3a2Q9EQR4 Gm5812-201ENSMUST00000061073 957 ntBASIC20.02■□□□□ 0.8
Clca3a2Q9EQR4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Clca3a2Q9EQR4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Clca3a2Q9EQR4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clca3a2Q9EQR4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clca3a2Q9EQR4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clca3a2Q9EQR4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clca3a2Q9EQR4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Gm10399-202ENSMUST00000202768 748 ntBASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clca3a2Q9EQR4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clca3a2Q9EQR4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clca3a2Q9EQR4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clca3a2Q9EQR4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clca3a2Q9EQR4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clca3a2Q9EQR4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Clca3a2Q9EQR4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clca3a2Q9EQR4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clca3a2Q9EQR4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clca3a2Q9EQR4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clca3a2Q9EQR4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clca3a2Q9EQR4 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.94■□□□□ 0.78
Clca3a2Q9EQR4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clca3a2Q9EQR4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clca3a2Q9EQR4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.94■□□□□ 0.78
Clca3a2Q9EQR4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clca3a2Q9EQR4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clca3a2Q9EQR4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clca3a2Q9EQR4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms