Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl8cQ9D6I0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl8cQ9D6I0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl8cQ9D6I0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rtl8cQ9D6I0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rtl8cQ9D6I0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Gm5921-201ENSMUST00000075898 882 ntBASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.71■□□□□ 0.59
Rtl8cQ9D6I0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Rtl8cQ9D6I0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rtl8cQ9D6I0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtl8cQ9D6I0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rtl8cQ9D6I0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rtl8cQ9D6I0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rtl8cQ9D6I0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rtl8cQ9D6I0 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.68■□□□□ 0.58
Rtl8cQ9D6I0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rtl8cQ9D6I0 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.68■□□□□ 0.58
Rtl8cQ9D6I0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rtl8cQ9D6I0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Gm43566-201ENSMUST00000196851 808 ntBASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rtl8cQ9D6I0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rtl8cQ9D6I0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtl8cQ9D6I0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Rtl8cQ9D6I0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtl8cQ9D6I0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtl8cQ9D6I0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rtl8cQ9D6I0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rtl8cQ9D6I0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rtl8cQ9D6I0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rtl8cQ9D6I0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rtl8cQ9D6I0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.64■□□□□ 0.57
Rtl8cQ9D6I0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtl8cQ9D6I0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtl8cQ9D6I0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtl8cQ9D6I0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtl8cQ9D6I0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rtl8cQ9D6I0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.63■□□□□ 0.57
Rtl8cQ9D6I0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rtl8cQ9D6I0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtl8cQ9D6I0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rtl8cQ9D6I0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rtl8cQ9D6I0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rtl8cQ9D6I0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Rtl8cQ9D6I0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl8cQ9D6I0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl8cQ9D6I0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.61■□□□□ 0.57
Rtl8cQ9D6I0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rtl8cQ9D6I0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rtl8cQ9D6I0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms