Protein–RNA interactions for Protein: Q9D662

Sec23b, Protein transport protein Sec23B, mousemouse

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec23bQ9D662 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec23bQ9D662 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec23bQ9D662 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec23bQ9D662 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec23bQ9D662 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.3■□□□□ 0.68
Sec23bQ9D662 Gm12366-201ENSMUST00000121722 873 ntBASIC19.3■□□□□ 0.68
Sec23bQ9D662 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.3■□□□□ 0.68
Sec23bQ9D662 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.3■□□□□ 0.68
Sec23bQ9D662 Gm5786-201ENSMUST00000085368 882 ntBASIC19.3■□□□□ 0.68
Sec23bQ9D662 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec23bQ9D662 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.29■□□□□ 0.68
Sec23bQ9D662 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.29■□□□□ 0.68
Sec23bQ9D662 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec23bQ9D662 Notumos-201ENSMUST00000151998 2659 ntBASIC19.28■□□□□ 0.68
Sec23bQ9D662 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sec23bQ9D662 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec23bQ9D662 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.28■□□□□ 0.68
Sec23bQ9D662 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.28■□□□□ 0.68
Sec23bQ9D662 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec23bQ9D662 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec23bQ9D662 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.28■□□□□ 0.68
Sec23bQ9D662 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sec23bQ9D662 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec23bQ9D662 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec23bQ9D662 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec23bQ9D662 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.27■□□□□ 0.68
Sec23bQ9D662 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Sec23bQ9D662 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec23bQ9D662 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec23bQ9D662 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.27■□□□□ 0.68
Sec23bQ9D662 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec23bQ9D662 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sec23bQ9D662 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sec23bQ9D662 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Sec23bQ9D662 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sec23bQ9D662 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec23bQ9D662 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec23bQ9D662 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec23bQ9D662 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec23bQ9D662 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec23bQ9D662 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.26■□□□□ 0.67
Sec23bQ9D662 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec23bQ9D662 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Sec23bQ9D662 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec23bQ9D662 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec23bQ9D662 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec23bQ9D662 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec23bQ9D662 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec23bQ9D662 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sec23bQ9D662 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec23bQ9D662 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec23bQ9D662 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sec23bQ9D662 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.24■□□□□ 0.67
Sec23bQ9D662 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec23bQ9D662 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sec23bQ9D662 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.23■□□□□ 0.67
Sec23bQ9D662 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec23bQ9D662 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec23bQ9D662 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec23bQ9D662 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sec23bQ9D662 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sec23bQ9D662 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec23bQ9D662 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec23bQ9D662 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sec23bQ9D662 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sec23bQ9D662 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Sec23bQ9D662 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.21■□□□□ 0.67
Sec23bQ9D662 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sec23bQ9D662 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec23bQ9D662 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sec23bQ9D662 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec23bQ9D662 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec23bQ9D662 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec23bQ9D662 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.19■□□□□ 0.66
Sec23bQ9D662 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sec23bQ9D662 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sec23bQ9D662 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Sec23bQ9D662 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sec23bQ9D662 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sec23bQ9D662 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms