Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lrrc40Q9CRC8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc40Q9CRC8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc40Q9CRC8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lrrc40Q9CRC8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lrrc40Q9CRC8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.78■□□□□ 0.92
Lrrc40Q9CRC8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lrrc40Q9CRC8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc40Q9CRC8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc40Q9CRC8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc40Q9CRC8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc40Q9CRC8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lrrc40Q9CRC8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.77■□□□□ 0.92
Lrrc40Q9CRC8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.77■□□□□ 0.92
Lrrc40Q9CRC8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lrrc40Q9CRC8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lrrc40Q9CRC8 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lrrc40Q9CRC8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lrrc40Q9CRC8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lrrc40Q9CRC8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lrrc40Q9CRC8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc40Q9CRC8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc40Q9CRC8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc40Q9CRC8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc40Q9CRC8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lrrc40Q9CRC8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lrrc40Q9CRC8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lrrc40Q9CRC8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc40Q9CRC8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc40Q9CRC8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lrrc40Q9CRC8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc40Q9CRC8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lrrc40Q9CRC8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Lrrc40Q9CRC8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms