Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkiras2Q9CR56 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkiras2Q9CR56 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nkiras2Q9CR56 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkiras2Q9CR56 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.65■□□□□ 0.58
Nkiras2Q9CR56 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkiras2Q9CR56 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Nkiras2Q9CR56 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkiras2Q9CR56 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkiras2Q9CR56 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nkiras2Q9CR56 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkiras2Q9CR56 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkiras2Q9CR56 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkiras2Q9CR56 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Gm22567-201ENSMUST00000175542 342 ntBASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkiras2Q9CR56 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkiras2Q9CR56 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkiras2Q9CR56 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkiras2Q9CR56 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkiras2Q9CR56 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkiras2Q9CR56 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkiras2Q9CR56 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkiras2Q9CR56 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkiras2Q9CR56 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nkiras2Q9CR56 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms