Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vta1Q9CR26 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Vta1Q9CR26 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Vta1Q9CR26 Gm43137-201ENSMUST00000198052 594 ntBASIC23.87■■□□□ 1.41
Vta1Q9CR26 Gm7143-201ENSMUST00000222811 859 ntBASIC23.87■■□□□ 1.41
Vta1Q9CR26 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vta1Q9CR26 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Vta1Q9CR26 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Vta1Q9CR26 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.87■■□□□ 1.41
Vta1Q9CR26 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vta1Q9CR26 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vta1Q9CR26 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vta1Q9CR26 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Vta1Q9CR26 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.86■■□□□ 1.41
Vta1Q9CR26 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Vta1Q9CR26 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vta1Q9CR26 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Vta1Q9CR26 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Vta1Q9CR26 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Vta1Q9CR26 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vta1Q9CR26 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vta1Q9CR26 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vta1Q9CR26 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.84■■□□□ 1.41
Vta1Q9CR26 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vta1Q9CR26 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Vta1Q9CR26 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vta1Q9CR26 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Vta1Q9CR26 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.84■■□□□ 1.41
Vta1Q9CR26 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Vta1Q9CR26 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Vta1Q9CR26 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.83■■□□□ 1.41
Vta1Q9CR26 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Vta1Q9CR26 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Vta1Q9CR26 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vta1Q9CR26 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Vta1Q9CR26 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Vta1Q9CR26 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Vta1Q9CR26 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vta1Q9CR26 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vta1Q9CR26 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Vta1Q9CR26 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vta1Q9CR26 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vta1Q9CR26 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vta1Q9CR26 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vta1Q9CR26 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.81■■□□□ 1.4
Vta1Q9CR26 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.81■■□□□ 1.4
Vta1Q9CR26 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Vta1Q9CR26 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vta1Q9CR26 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Vta1Q9CR26 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vta1Q9CR26 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Vta1Q9CR26 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.8■■□□□ 1.4
Vta1Q9CR26 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Vta1Q9CR26 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Vta1Q9CR26 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Vta1Q9CR26 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Vta1Q9CR26 Mir7075-201ENSMUST00000184187 82 ntBASIC23.79■■□□□ 1.4
Vta1Q9CR26 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vta1Q9CR26 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vta1Q9CR26 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vta1Q9CR26 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.78■■□□□ 1.4
Vta1Q9CR26 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vta1Q9CR26 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vta1Q9CR26 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vta1Q9CR26 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vta1Q9CR26 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vta1Q9CR26 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vta1Q9CR26 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Vta1Q9CR26 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vta1Q9CR26 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.76■■□□□ 1.39
Vta1Q9CR26 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.76■■□□□ 1.39
Vta1Q9CR26 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vta1Q9CR26 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Vta1Q9CR26 Gm8495-201ENSMUST00000188740 694 ntBASIC23.75■■□□□ 1.39
Vta1Q9CR26 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Vta1Q9CR26 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vta1Q9CR26 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vta1Q9CR26 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vta1Q9CR26 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vta1Q9CR26 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms