Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cstf1Q99LC2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.93■□□□□ 0.94
Cstf1Q99LC2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cstf1Q99LC2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.93■□□□□ 0.94
Cstf1Q99LC2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.93■□□□□ 0.94
Cstf1Q99LC2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.93■□□□□ 0.94
Cstf1Q99LC2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cstf1Q99LC2 Gm8493-201ENSMUST00000196881 489 ntBASIC20.92■□□□□ 0.94
Cstf1Q99LC2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.92■□□□□ 0.94
Cstf1Q99LC2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cstf1Q99LC2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cstf1Q99LC2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cstf1Q99LC2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.91■□□□□ 0.94
Cstf1Q99LC2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cstf1Q99LC2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.9■□□□□ 0.94
Cstf1Q99LC2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cstf1Q99LC2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cstf1Q99LC2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cstf1Q99LC2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.89■□□□□ 0.93
Cstf1Q99LC2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cstf1Q99LC2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cstf1Q99LC2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cstf1Q99LC2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cstf1Q99LC2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cstf1Q99LC2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cstf1Q99LC2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cstf1Q99LC2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.87■□□□□ 0.93
Cstf1Q99LC2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cstf1Q99LC2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cstf1Q99LC2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cstf1Q99LC2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cstf1Q99LC2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cstf1Q99LC2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cstf1Q99LC2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cstf1Q99LC2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.85■□□□□ 0.93
Cstf1Q99LC2 Gm7291-201ENSMUST00000199147 382 ntBASIC20.85■□□□□ 0.93
Cstf1Q99LC2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cstf1Q99LC2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cstf1Q99LC2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cstf1Q99LC2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cstf1Q99LC2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cstf1Q99LC2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.83■□□□□ 0.93
Cstf1Q99LC2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.83■□□□□ 0.93
Cstf1Q99LC2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cstf1Q99LC2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cstf1Q99LC2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cstf1Q99LC2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cstf1Q99LC2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Cstf1Q99LC2 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.81■□□□□ 0.92
Cstf1Q99LC2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cstf1Q99LC2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cstf1Q99LC2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cstf1Q99LC2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cstf1Q99LC2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Cstf1Q99LC2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cstf1Q99LC2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Cstf1Q99LC2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.8■□□□□ 0.92
Cstf1Q99LC2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cstf1Q99LC2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.79■□□□□ 0.92
Cstf1Q99LC2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cstf1Q99LC2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cstf1Q99LC2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cstf1Q99LC2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cstf1Q99LC2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cstf1Q99LC2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cstf1Q99LC2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.78■□□□□ 0.92
Cstf1Q99LC2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cstf1Q99LC2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms