Protein–RNA interactions for Protein: Q99JB6

Foxp3, Forkhead box protein P3, mousemouse

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxp3Q99JB6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Foxp3Q99JB6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.2■□□□□ 0.98
Foxp3Q99JB6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxp3Q99JB6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxp3Q99JB6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Foxp3Q99JB6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxp3Q99JB6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxp3Q99JB6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxp3Q99JB6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxp3Q99JB6 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Foxp3Q99JB6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Foxp3Q99JB6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Foxp3Q99JB6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxp3Q99JB6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxp3Q99JB6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxp3Q99JB6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Foxp3Q99JB6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Foxp3Q99JB6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Foxp3Q99JB6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Foxp3Q99JB6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Foxp3Q99JB6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Foxp3Q99JB6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Foxp3Q99JB6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Foxp3Q99JB6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxp3Q99JB6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxp3Q99JB6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxp3Q99JB6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxp3Q99JB6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxp3Q99JB6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxp3Q99JB6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxp3Q99JB6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Foxp3Q99JB6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxp3Q99JB6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxp3Q99JB6 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.09■□□□□ 0.97
Foxp3Q99JB6 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.09■□□□□ 0.97
Foxp3Q99JB6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxp3Q99JB6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Foxp3Q99JB6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Foxp3Q99JB6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms