Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb20Q91XZ9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pcdhb20Q91XZ9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhb20Q91XZ9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb20Q91XZ9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb20Q91XZ9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb20Q91XZ9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhb20Q91XZ9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb20Q91XZ9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb20Q91XZ9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb20Q91XZ9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb20Q91XZ9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb20Q91XZ9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb20Q91XZ9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb20Q91XZ9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhb20Q91XZ9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb20Q91XZ9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb20Q91XZ9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb20Q91XZ9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb20Q91XZ9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb20Q91XZ9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb20Q91XZ9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb20Q91XZ9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhb20Q91XZ9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb20Q91XZ9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb20Q91XZ9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb20Q91XZ9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
Pcdhb20Q91XZ9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb20Q91XZ9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb20Q91XZ9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb20Q91XZ9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb20Q91XZ9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb20Q91XZ9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb20Q91XZ9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb20Q91XZ9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
Pcdhb20Q91XZ9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb20Q91XZ9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhb20Q91XZ9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb20Q91XZ9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb20Q91XZ9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb20Q91XZ9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb20Q91XZ9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb20Q91XZ9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb20Q91XZ9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb20Q91XZ9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb20Q91XZ9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb20Q91XZ9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb20Q91XZ9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb20Q91XZ9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb20Q91XZ9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb20Q91XZ9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb20Q91XZ9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb20Q91XZ9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms