Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb6Q91XZ4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb6Q91XZ4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb6Q91XZ4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb6Q91XZ4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Pcdhb6Q91XZ4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb6Q91XZ4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Pcdhb6Q91XZ4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb6Q91XZ4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pcdhb6Q91XZ4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb6Q91XZ4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb6Q91XZ4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb6Q91XZ4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb6Q91XZ4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb6Q91XZ4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb6Q91XZ4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb6Q91XZ4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb6Q91XZ4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhb6Q91XZ4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb6Q91XZ4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb6Q91XZ4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb6Q91XZ4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb6Q91XZ4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb6Q91XZ4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb6Q91XZ4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.54■■□□□ 1.04
Pcdhb6Q91XZ4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb6Q91XZ4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb6Q91XZ4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb6Q91XZ4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb6Q91XZ4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb6Q91XZ4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb6Q91XZ4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.53■■□□□ 1.04
Pcdhb6Q91XZ4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.52■■□□□ 1.04
Pcdhb6Q91XZ4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb6Q91XZ4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.52■■□□□ 1.04
Pcdhb6Q91XZ4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb6Q91XZ4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb6Q91XZ4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb6Q91XZ4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
Pcdhb6Q91XZ4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb6Q91XZ4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb6Q91XZ4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdhb6Q91XZ4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdhb6Q91XZ4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.51■■□□□ 1.03
Pcdhb6Q91XZ4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb6Q91XZ4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhb6Q91XZ4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb6Q91XZ4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhb6Q91XZ4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb6Q91XZ4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb6Q91XZ4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb6Q91XZ4 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.49■■□□□ 1.03
Pcdhb6Q91XZ4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb6Q91XZ4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb6Q91XZ4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Gm10232-201ENSMUST00000089221 720 ntBASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb6Q91XZ4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb6Q91XZ4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb6Q91XZ4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
Pcdhb6Q91XZ4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb6Q91XZ4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb6Q91XZ4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb6Q91XZ4 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.45■■□□□ 1.02
Pcdhb6Q91XZ4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb6Q91XZ4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb6Q91XZ4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb6Q91XZ4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb6Q91XZ4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms