Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vps50Q8CI71 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.37■□□□□ 0.85
Vps50Q8CI71 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.37■□□□□ 0.85
Vps50Q8CI71 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Vps50Q8CI71 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps50Q8CI71 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps50Q8CI71 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.36■□□□□ 0.85
Vps50Q8CI71 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps50Q8CI71 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps50Q8CI71 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vps50Q8CI71 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps50Q8CI71 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.36■□□□□ 0.85
Vps50Q8CI71 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vps50Q8CI71 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps50Q8CI71 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps50Q8CI71 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps50Q8CI71 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps50Q8CI71 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Vps50Q8CI71 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.35■□□□□ 0.85
Vps50Q8CI71 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps50Q8CI71 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps50Q8CI71 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vps50Q8CI71 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.34■□□□□ 0.85
Vps50Q8CI71 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vps50Q8CI71 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vps50Q8CI71 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps50Q8CI71 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps50Q8CI71 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps50Q8CI71 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps50Q8CI71 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps50Q8CI71 Gm22567-201ENSMUST00000175542 342 ntBASIC20.33■□□□□ 0.85
Vps50Q8CI71 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps50Q8CI71 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps50Q8CI71 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps50Q8CI71 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps50Q8CI71 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps50Q8CI71 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Vps50Q8CI71 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.32■□□□□ 0.84
Vps50Q8CI71 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vps50Q8CI71 Gm15820-201ENSMUST00000201566 728 ntBASIC20.32■□□□□ 0.84
Vps50Q8CI71 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Vps50Q8CI71 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vps50Q8CI71 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps50Q8CI71 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.31■□□□□ 0.84
Vps50Q8CI71 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.31■□□□□ 0.84
Vps50Q8CI71 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps50Q8CI71 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps50Q8CI71 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vps50Q8CI71 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps50Q8CI71 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps50Q8CI71 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps50Q8CI71 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.3■□□□□ 0.84
Vps50Q8CI71 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps50Q8CI71 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps50Q8CI71 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Vps50Q8CI71 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.28■□□□□ 0.84
Vps50Q8CI71 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.28■□□□□ 0.84
Vps50Q8CI71 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps50Q8CI71 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Vps50Q8CI71 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Vps50Q8CI71 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps50Q8CI71 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps50Q8CI71 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps50Q8CI71 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Vps50Q8CI71 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps50Q8CI71 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps50Q8CI71 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps50Q8CI71 Gm13238-201ENSMUST00000117655 780 ntBASIC20.26■□□□□ 0.83
Vps50Q8CI71 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps50Q8CI71 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps50Q8CI71 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps50Q8CI71 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.26■□□□□ 0.83
Vps50Q8CI71 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps50Q8CI71 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps50Q8CI71 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vps50Q8CI71 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps50Q8CI71 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.25■□□□□ 0.83
Vps50Q8CI71 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps50Q8CI71 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Vps50Q8CI71 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vps50Q8CI71 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Vps50Q8CI71 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vps50Q8CI71 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms