Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx6Q8C7R7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx6Q8C7R7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx6Q8C7R7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx6Q8C7R7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx6Q8C7R7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx6Q8C7R7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfx6Q8C7R7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rfx6Q8C7R7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfx6Q8C7R7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx6Q8C7R7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Rfx6Q8C7R7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx6Q8C7R7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx6Q8C7R7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfx6Q8C7R7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Gm14523-201ENSMUST00000117260 558 ntBASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rfx6Q8C7R7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfx6Q8C7R7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx6Q8C7R7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx6Q8C7R7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rfx6Q8C7R7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfx6Q8C7R7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rfx6Q8C7R7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.13■□□□□ 0.97
Rfx6Q8C7R7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx6Q8C7R7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx6Q8C7R7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx6Q8C7R7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfx6Q8C7R7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rfx6Q8C7R7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 Gm7332-201ENSMUST00000118351 454 ntBASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.11■□□□□ 0.97
Rfx6Q8C7R7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx6Q8C7R7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rfx6Q8C7R7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfx6Q8C7R7 Gm11175-201ENSMUST00000116172 543 ntBASIC21.1■□□□□ 0.97
Rfx6Q8C7R7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Rfx6Q8C7R7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfx6Q8C7R7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.08■□□□□ 0.97
Rfx6Q8C7R7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.08■□□□□ 0.97
Rfx6Q8C7R7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfx6Q8C7R7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Rfx6Q8C7R7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms