Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Trim9Q8C7M3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Trim9Q8C7M3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Trim9Q8C7M3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trim9Q8C7M3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim9Q8C7M3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim9Q8C7M3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim9Q8C7M3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.18■■□□□ 1.3
Trim9Q8C7M3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim9Q8C7M3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim9Q8C7M3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim9Q8C7M3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trim9Q8C7M3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Trim9Q8C7M3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.17■■□□□ 1.3
Trim9Q8C7M3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim9Q8C7M3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim9Q8C7M3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Trim9Q8C7M3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Trim9Q8C7M3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim9Q8C7M3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Trim9Q8C7M3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim9Q8C7M3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Trim9Q8C7M3 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.15■■□□□ 1.3
Trim9Q8C7M3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.15■■□□□ 1.3
Trim9Q8C7M3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
Trim9Q8C7M3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trim9Q8C7M3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim9Q8C7M3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim9Q8C7M3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim9Q8C7M3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim9Q8C7M3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim9Q8C7M3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim9Q8C7M3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim9Q8C7M3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim9Q8C7M3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim9Q8C7M3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim9Q8C7M3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim9Q8C7M3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim9Q8C7M3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Trim9Q8C7M3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim9Q8C7M3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim9Q8C7M3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Trim9Q8C7M3 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.11■■□□□ 1.29
Trim9Q8C7M3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim9Q8C7M3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.11■■□□□ 1.29
Trim9Q8C7M3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim9Q8C7M3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim9Q8C7M3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim9Q8C7M3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim9Q8C7M3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Trim9Q8C7M3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim9Q8C7M3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim9Q8C7M3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim9Q8C7M3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trim9Q8C7M3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim9Q8C7M3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim9Q8C7M3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.08■■□□□ 1.29
Trim9Q8C7M3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim9Q8C7M3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim9Q8C7M3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim9Q8C7M3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Trim9Q8C7M3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Trim9Q8C7M3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Gm10232-201ENSMUST00000089221 720 ntBASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Trim9Q8C7M3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Trim9Q8C7M3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim9Q8C7M3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim9Q8C7M3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim9Q8C7M3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim9Q8C7M3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim9Q8C7M3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim9Q8C7M3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms