Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap54Q8C6S9 Gm27405-201ENSMUST00000184201 112 ntBASIC20.46■□□□□ 0.87
Cfap54Q8C6S9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.46■□□□□ 0.87
Cfap54Q8C6S9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cfap54Q8C6S9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.46■□□□□ 0.87
Cfap54Q8C6S9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
Cfap54Q8C6S9 Gm43173-201ENSMUST00000202246 593 ntBASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.44■□□□□ 0.86
Cfap54Q8C6S9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap54Q8C6S9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap54Q8C6S9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.43■□□□□ 0.86
Cfap54Q8C6S9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Cfap54Q8C6S9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cfap54Q8C6S9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cfap54Q8C6S9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cfap54Q8C6S9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfap54Q8C6S9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfap54Q8C6S9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap54Q8C6S9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap54Q8C6S9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap54Q8C6S9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cfap54Q8C6S9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfap54Q8C6S9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Cfap54Q8C6S9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cfap54Q8C6S9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cfap54Q8C6S9 Gm12251-201ENSMUST00000117893 792 ntBASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cfap54Q8C6S9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Gm37179-201ENSMUST00000194862 823 ntBASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Cfap54Q8C6S9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap54Q8C6S9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.35■□□□□ 0.85
Cfap54Q8C6S9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap54Q8C6S9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cfap54Q8C6S9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cfap54Q8C6S9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cfap54Q8C6S9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms