Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Smg1Q8BKX6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.08■□□□□ 0.49
Smg1Q8BKX6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smg1Q8BKX6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smg1Q8BKX6 Gm10493-201ENSMUST00000097270 612 ntBASIC18.08■□□□□ 0.48
Smg1Q8BKX6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Smg1Q8BKX6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.07■□□□□ 0.48
Smg1Q8BKX6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smg1Q8BKX6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smg1Q8BKX6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smg1Q8BKX6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Smg1Q8BKX6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smg1Q8BKX6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smg1Q8BKX6 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.06■□□□□ 0.48
Smg1Q8BKX6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smg1Q8BKX6 Gm22325-201ENSMUST00000158904 308 ntBASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Gm8493-201ENSMUST00000196881 489 ntBASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smg1Q8BKX6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smg1Q8BKX6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smg1Q8BKX6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smg1Q8BKX6 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.04■□□□□ 0.48
Smg1Q8BKX6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Smg1Q8BKX6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smg1Q8BKX6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.03■□□□□ 0.48
Smg1Q8BKX6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smg1Q8BKX6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smg1Q8BKX6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.03■□□□□ 0.48
Smg1Q8BKX6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smg1Q8BKX6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Smg1Q8BKX6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smg1Q8BKX6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smg1Q8BKX6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smg1Q8BKX6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smg1Q8BKX6 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smg1Q8BKX6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.01■□□□□ 0.47
Smg1Q8BKX6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smg1Q8BKX6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smg1Q8BKX6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smg1Q8BKX6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smg1Q8BKX6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.01■□□□□ 0.47
Smg1Q8BKX6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smg1Q8BKX6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smg1Q8BKX6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18■□□□□ 0.47
Smg1Q8BKX6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18■□□□□ 0.47
Smg1Q8BKX6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smg1Q8BKX6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smg1Q8BKX6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18■□□□□ 0.47
Smg1Q8BKX6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18■□□□□ 0.47
Smg1Q8BKX6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smg1Q8BKX6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.98■□□□□ 0.47
Smg1Q8BKX6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms