Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh20Q8BIZ0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh20Q8BIZ0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh20Q8BIZ0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdh20Q8BIZ0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdh20Q8BIZ0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh20Q8BIZ0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh20Q8BIZ0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh20Q8BIZ0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh20Q8BIZ0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh20Q8BIZ0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh20Q8BIZ0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdh20Q8BIZ0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh20Q8BIZ0 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdh20Q8BIZ0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh20Q8BIZ0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh20Q8BIZ0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh20Q8BIZ0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh20Q8BIZ0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh20Q8BIZ0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdh20Q8BIZ0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh20Q8BIZ0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh20Q8BIZ0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh20Q8BIZ0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Pcdh20Q8BIZ0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh20Q8BIZ0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 Gm13238-201ENSMUST00000117655 780 ntBASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh20Q8BIZ0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh20Q8BIZ0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdh20Q8BIZ0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcdh20Q8BIZ0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh20Q8BIZ0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh20Q8BIZ0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh20Q8BIZ0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh20Q8BIZ0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Pcdh20Q8BIZ0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdh20Q8BIZ0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh20Q8BIZ0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh20Q8BIZ0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcdh20Q8BIZ0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh20Q8BIZ0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh20Q8BIZ0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh20Q8BIZ0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh20Q8BIZ0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.18■□□□□ 0.82
Pcdh20Q8BIZ0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms