Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg4bQ8BGE6 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.73■□□□□ 0.75
Atg4bQ8BGE6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg4bQ8BGE6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg4bQ8BGE6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg4bQ8BGE6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
Atg4bQ8BGE6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg4bQ8BGE6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg4bQ8BGE6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Atg4bQ8BGE6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Atg4bQ8BGE6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg4bQ8BGE6 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.69■□□□□ 0.74
Atg4bQ8BGE6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.69■□□□□ 0.74
Atg4bQ8BGE6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.69■□□□□ 0.74
Atg4bQ8BGE6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Atg4bQ8BGE6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.69■□□□□ 0.74
Atg4bQ8BGE6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.69■□□□□ 0.74
Atg4bQ8BGE6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4bQ8BGE6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4bQ8BGE6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4bQ8BGE6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg4bQ8BGE6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Gm15820-201ENSMUST00000201566 728 ntBASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg4bQ8BGE6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4bQ8BGE6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4bQ8BGE6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.66■□□□□ 0.74
Atg4bQ8BGE6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.66■□□□□ 0.74
Atg4bQ8BGE6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg4bQ8BGE6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.66■□□□□ 0.74
Atg4bQ8BGE6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Gm15546-201ENSMUST00000122095 826 ntBASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg4bQ8BGE6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atg4bQ8BGE6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atg4bQ8BGE6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Atg4bQ8BGE6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg4bQ8BGE6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.64■□□□□ 0.73
Atg4bQ8BGE6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.64■□□□□ 0.73
Atg4bQ8BGE6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg4bQ8BGE6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atg4bQ8BGE6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Atg4bQ8BGE6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg4bQ8BGE6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg4bQ8BGE6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg4bQ8BGE6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atg4bQ8BGE6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
Atg4bQ8BGE6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atg4bQ8BGE6 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.62■□□□□ 0.73
Atg4bQ8BGE6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg4bQ8BGE6 Gm10399-202ENSMUST00000202768 748 ntBASIC19.62■□□□□ 0.73
Atg4bQ8BGE6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg4bQ8BGE6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg4bQ8BGE6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atg4bQ8BGE6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atg4bQ8BGE6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atg4bQ8BGE6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms